Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.91□□□□□ -0.02
Col6a2Q02788 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.91□□□□□ -0.02
Col6a2Q02788 Mir6990-201ENSMUST00000183724 91 ntBASIC14.91□□□□□ -0.02
Col6a2Q02788 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.91□□□□□ -0.02
Col6a2Q02788 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.91□□□□□ -0.02
Col6a2Q02788 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.91□□□□□ -0.02
Col6a2Q02788 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col6a2Q02788 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col6a2Q02788 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Col6a2Q02788 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a2Q02788 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.91□□□□□ -0.02
Col6a2Q02788 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.9□□□□□ -0.02
Col6a2Q02788 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Gm43767-201ENSMUST00000198933 381 ntBASIC14.9□□□□□ -0.02
Col6a2Q02788 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Gm43125-201ENSMUST00000201724 730 ntBASIC14.9□□□□□ -0.02
Col6a2Q02788 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Gm8396-201ENSMUST00000057361 823 ntBASIC14.9□□□□□ -0.02
Col6a2Q02788 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col6a2Q02788 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.9□□□□□ -0.02
Col6a2Q02788 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.9□□□□□ -0.02
Col6a2Q02788 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a2Q02788 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.9□□□□□ -0.02
Col6a2Q02788 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Col6a2Q02788 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col6a2Q02788 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col6a2Q02788 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.89□□□□□ -0.03
Col6a2Q02788 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.89□□□□□ -0.03
Col6a2Q02788 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.89□□□□□ -0.03
Col6a2Q02788 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.89□□□□□ -0.03
Col6a2Q02788 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Gm18057-201ENSMUST00000208220 503 ntBASIC14.89□□□□□ -0.03
Col6a2Q02788 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.89□□□□□ -0.03
Col6a2Q02788 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col6a2Q02788 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col6a2Q02788 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a2Q02788 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Col6a2Q02788 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.88□□□□□ -0.03
Col6a2Q02788 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Col6a2Q02788 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms