Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SgcbP82349 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.33□□□□□ -0.28
SgcbP82349 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.32□□□□□ -0.28
SgcbP82349 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SgcbP82349 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SgcbP82349 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SgcbP82349 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.32□□□□□ -0.28
SgcbP82349 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.32□□□□□ -0.28
SgcbP82349 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.32□□□□□ -0.28
SgcbP82349 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.32□□□□□ -0.28
SgcbP82349 Gm24513-201ENSMUST00000174964 138 ntBASIC13.32□□□□□ -0.28
SgcbP82349 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.32□□□□□ -0.28
SgcbP82349 Gm27397-201ENSMUST00000184997 107 ntBASIC13.32□□□□□ -0.28
SgcbP82349 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.32□□□□□ -0.28
SgcbP82349 Gm2272-201ENSMUST00000194903 582 ntBASIC13.32□□□□□ -0.28
SgcbP82349 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.32□□□□□ -0.28
SgcbP82349 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.32□□□□□ -0.28
SgcbP82349 Gm10154-201ENSMUST00000084445 354 ntBASIC13.32□□□□□ -0.28
SgcbP82349 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.32□□□□□ -0.28
SgcbP82349 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SgcbP82349 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.32□□□□□ -0.28
SgcbP82349 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.32□□□□□ -0.28
SgcbP82349 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcbP82349 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
SgcbP82349 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SgcbP82349 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SgcbP82349 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.31□□□□□ -0.28
SgcbP82349 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.31□□□□□ -0.28
SgcbP82349 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SgcbP82349 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Celf4-206ENSMUST00000224553 1729 ntBASIC13.31□□□□□ -0.28
SgcbP82349 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SgcbP82349 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
SgcbP82349 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.31□□□□□ -0.28
SgcbP82349 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.31□□□□□ -0.28
SgcbP82349 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.31□□□□□ -0.28
SgcbP82349 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SgcbP82349 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.31□□□□□ -0.28
SgcbP82349 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SgcbP82349 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
SgcbP82349 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.31□□□□□ -0.28
SgcbP82349 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcbP82349 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcbP82349 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcbP82349 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SgcbP82349 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcbP82349 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.3□□□□□ -0.28
SgcbP82349 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcbP82349 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcbP82349 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcbP82349 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SgcbP82349 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.3□□□□□ -0.28
SgcbP82349 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.3□□□□□ -0.28
SgcbP82349 Gm6736-201ENSMUST00000166583 948 ntBASIC13.3□□□□□ -0.28
SgcbP82349 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.3□□□□□ -0.28
SgcbP82349 Gm2756-201ENSMUST00000195851 400 ntBASIC13.3□□□□□ -0.28
SgcbP82349 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.3□□□□□ -0.28
SgcbP82349 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
SgcbP82349 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SgcbP82349 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcbP82349 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.3□□□□□ -0.28
SgcbP82349 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SgcbP82349 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms