Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shox2P70390 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shox2P70390 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.78□□□□□ -0.04
Shox2P70390 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shox2P70390 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shox2P70390 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Shox2P70390 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shox2P70390 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Shox2P70390 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shox2P70390 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shox2P70390 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shox2P70390 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shox2P70390 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shox2P70390 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shox2P70390 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shox2P70390 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.77□□□□□ -0.05
Shox2P70390 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.77□□□□□ -0.05
Shox2P70390 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shox2P70390 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Shox2P70390 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.77□□□□□ -0.05
Shox2P70390 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.77□□□□□ -0.05
Shox2P70390 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shox2P70390 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Shox2P70390 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shox2P70390 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shox2P70390 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Shox2P70390 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.77□□□□□ -0.05
Shox2P70390 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Shox2P70390 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shox2P70390 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shox2P70390 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shox2P70390 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shox2P70390 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.76□□□□□ -0.05
Shox2P70390 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Shox2P70390 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Shox2P70390 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Shox2P70390 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.76□□□□□ -0.05
Shox2P70390 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Gm43767-201ENSMUST00000198933 381 ntBASIC14.76□□□□□ -0.05
Shox2P70390 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.76□□□□□ -0.05
Shox2P70390 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Shox2P70390 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Shox2P70390 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Shox2P70390 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.76□□□□□ -0.05
Shox2P70390 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shox2P70390 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Shox2P70390 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Shox2P70390 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Shox2P70390 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.75□□□□□ -0.05
Shox2P70390 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shox2P70390 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.75□□□□□ -0.05
Shox2P70390 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shox2P70390 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shox2P70390 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shox2P70390 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shox2P70390 Gm8318-201ENSMUST00000182954 872 ntBASIC14.75□□□□□ -0.05
Shox2P70390 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.75□□□□□ -0.05
Shox2P70390 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.75□□□□□ -0.05
Shox2P70390 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Shox2P70390 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shox2P70390 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.75□□□□□ -0.05
Shox2P70390 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Shox2P70390 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Shox2P70390 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shox2P70390 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shox2P70390 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Shox2P70390 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.75□□□□□ -0.05
Shox2P70390 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shox2P70390 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shox2P70390 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shox2P70390 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Shox2P70390 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.74□□□□□ -0.05
Shox2P70390 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.74□□□□□ -0.05
Shox2P70390 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms