Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pfn1P62962 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Pfn1P62962 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.62□□□□□ -0.55
Pfn1P62962 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.62□□□□□ -0.55
Pfn1P62962 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.62□□□□□ -0.55
Pfn1P62962 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Gm13559-201ENSMUST00000120476 863 ntBASIC11.62□□□□□ -0.55
Pfn1P62962 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.62□□□□□ -0.55
Pfn1P62962 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Pfn1P62962 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
Pfn1P62962 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pfn1P62962 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Gm37722-201ENSMUST00000193757 208 ntBASIC11.62□□□□□ -0.55
Pfn1P62962 Gm18959-201ENSMUST00000208954 655 ntBASIC11.62□□□□□ -0.55
Pfn1P62962 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC11.62□□□□□ -0.55
Pfn1P62962 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pfn1P62962 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pfn1P62962 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.62□□□□□ -0.55
Pfn1P62962 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pfn1P62962 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pfn1P62962 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfn1P62962 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pfn1P62962 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.61□□□□□ -0.55
Pfn1P62962 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pfn1P62962 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pfn1P62962 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pfn1P62962 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.61□□□□□ -0.55
Pfn1P62962 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pfn1P62962 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.61□□□□□ -0.55
Pfn1P62962 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.61□□□□□ -0.55
Pfn1P62962 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
Pfn1P62962 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.61□□□□□ -0.55
Pfn1P62962 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.61□□□□□ -0.55
Pfn1P62962 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.61□□□□□ -0.55
Pfn1P62962 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pfn1P62962 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.61□□□□□ -0.55
Pfn1P62962 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pfn1P62962 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.61□□□□□ -0.55
Pfn1P62962 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Pfn1P62962 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pfn1P62962 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Pfn1P62962 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pfn1P62962 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.61□□□□□ -0.55
Pfn1P62962 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfn1P62962 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfn1P62962 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.6□□□□□ -0.55
Pfn1P62962 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.6□□□□□ -0.55
Pfn1P62962 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pfn1P62962 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.6□□□□□ -0.55
Pfn1P62962 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfn1P62962 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfn1P62962 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms