Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ybx1P62960 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ybx1P62960 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ybx1P62960 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ybx1P62960 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ybx1P62960 Gm18766-201ENSMUST00000189811 808 ntBASIC15.29■□□□□ 0.04
Ybx1P62960 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.29■□□□□ 0.04
Ybx1P62960 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ybx1P62960 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ybx1P62960 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ybx1P62960 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ybx1P62960 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ybx1P62960 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ybx1P62960 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ybx1P62960 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.29■□□□□ 0.04
Ybx1P62960 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ybx1P62960 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.28■□□□□ 0.04
Ybx1P62960 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ybx1P62960 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ybx1P62960 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.28■□□□□ 0.04
Ybx1P62960 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.28■□□□□ 0.04
Ybx1P62960 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.28■□□□□ 0.04
Ybx1P62960 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ybx1P62960 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.28■□□□□ 0.04
Ybx1P62960 Mir8102-201ENSMUST00000184148 139 ntBASIC15.28■□□□□ 0.04
Ybx1P62960 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Gm18049-201ENSMUST00000208909 581 ntBASIC15.28■□□□□ 0.04
Ybx1P62960 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.28■□□□□ 0.04
Ybx1P62960 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ybx1P62960 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.28■□□□□ 0.04
Ybx1P62960 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.28■□□□□ 0.04
Ybx1P62960 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ybx1P62960 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ybx1P62960 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Ybx1P62960 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ybx1P62960 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ybx1P62960 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ybx1P62960 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ybx1P62960 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ybx1P62960 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ybx1P62960 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ybx1P62960 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ybx1P62960 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ybx1P62960 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.27■□□□□ 0.04
Ybx1P62960 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.27■□□□□ 0.04
Ybx1P62960 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ybx1P62960 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ybx1P62960 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ybx1P62960 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ybx1P62960 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ybx1P62960 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.03
Ybx1P62960 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.27■□□□□ 0.03
Ybx1P62960 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ybx1P62960 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ybx1P62960 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ybx1P62960 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ybx1P62960 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ybx1P62960 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ybx1P62960 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.26■□□□□ 0.03
Ybx1P62960 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.26■□□□□ 0.03
Ybx1P62960 Gm11424-201ENSMUST00000121929 829 ntBASIC15.26■□□□□ 0.03
Ybx1P62960 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.26■□□□□ 0.03
Ybx1P62960 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.26■□□□□ 0.03
Ybx1P62960 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.26■□□□□ 0.03
Ybx1P62960 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.26■□□□□ 0.03
Ybx1P62960 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.26■□□□□ 0.03
Ybx1P62960 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Ybx1P62960 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms