Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.67□□□□□ -0.7
Rpl39P62892 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.67□□□□□ -0.7
Rpl39P62892 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Rpl39P62892 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rpl39P62892 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Rpl39P62892 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Rpl39P62892 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.67□□□□□ -0.7
Rpl39P62892 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Rpl39P62892 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rpl39P62892 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC10.67□□□□□ -0.7
Rpl39P62892 Gm23547-201ENSMUST00000158210 271 ntBASIC10.67□□□□□ -0.7
Rpl39P62892 Gm6623-201ENSMUST00000173570 544 ntBASIC10.67□□□□□ -0.7
Rpl39P62892 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.67□□□□□ -0.7
Rpl39P62892 Gm43799-201ENSMUST00000201845 579 ntBASIC10.67□□□□□ -0.7
Rpl39P62892 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rpl39P62892 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rpl39P62892 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rpl39P62892 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Rpl39P62892 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.67□□□□□ -0.7
Rpl39P62892 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl39P62892 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Rpl39P62892 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rpl39P62892 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rpl39P62892 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC10.66□□□□□ -0.7
Rpl39P62892 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.66□□□□□ -0.7
Rpl39P62892 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC10.66□□□□□ -0.7
Rpl39P62892 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC10.66□□□□□ -0.7
Rpl39P62892 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.66□□□□□ -0.7
Rpl39P62892 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Rpl39P62892 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Rpl39P62892 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl39P62892 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rpl39P62892 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rpl39P62892 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rpl39P62892 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rpl39P62892 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Rpl39P62892 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rpl39P62892 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rpl39P62892 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rpl39P62892 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Rpl39P62892 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.65□□□□□ -0.7
Rpl39P62892 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rpl39P62892 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rpl39P62892 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Rpl39P62892 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rpl39P62892 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.65□□□□□ -0.7
Rpl39P62892 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rpl39P62892 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC10.65□□□□□ -0.7
Rpl39P62892 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rpl39P62892 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.65□□□□□ -0.7
Rpl39P62892 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rpl39P62892 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms