Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm5P62322 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm5P62322 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm5P62322 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lsm5P62322 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lsm5P62322 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm5P62322 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.48□□□□□ -0.41
Lsm5P62322 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.48□□□□□ -0.41
Lsm5P62322 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm5P62322 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm5P62322 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm5P62322 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Lsm5P62322 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Lsm5P62322 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lsm5P62322 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Lsm5P62322 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Lsm5P62322 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lsm5P62322 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.47□□□□□ -0.41
Lsm5P62322 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Lsm5P62322 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.47□□□□□ -0.41
Lsm5P62322 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lsm5P62322 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lsm5P62322 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lsm5P62322 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm5P62322 Carlr-201ENSMUST00000181515 2574 ntBASIC12.47□□□□□ -0.41
Lsm5P62322 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Lsm5P62322 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lsm5P62322 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm5P62322 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.46□□□□□ -0.41
Lsm5P62322 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lsm5P62322 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lsm5P62322 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Lsm5P62322 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lsm5P62322 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Gm13168-201ENSMUST00000121771 632 ntBASIC12.46□□□□□ -0.41
Lsm5P62322 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.46□□□□□ -0.41
Lsm5P62322 Gm37722-201ENSMUST00000193757 208 ntBASIC12.46□□□□□ -0.41
Lsm5P62322 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.46□□□□□ -0.41
Lsm5P62322 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lsm5P62322 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.46□□□□□ -0.41
Lsm5P62322 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm5P62322 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Lsm5P62322 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm5P62322 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Lsm5P62322 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm5P62322 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm5P62322 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm5P62322 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm5P62322 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm5P62322 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.46□□□□□ -0.42
Lsm5P62322 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm5P62322 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm5P62322 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm5P62322 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm5P62322 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm5P62322 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm5P62322 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm5P62322 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm5P62322 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm5P62322 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Lsm5P62322 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm5P62322 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm5P62322 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm5P62322 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm5P62322 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms