Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.66□□□□□ -0.22
Lsm3P62311 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Lsm3P62311 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.66□□□□□ -0.22
Lsm3P62311 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lsm3P62311 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.65□□□□□ -0.22
Lsm3P62311 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.65□□□□□ -0.22
Lsm3P62311 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Lsm3P62311 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Lsm3P62311 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Lsm3P62311 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Lsm3P62311 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lsm3P62311 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm3P62311 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lsm3P62311 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.64□□□□□ -0.23
Lsm3P62311 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.64□□□□□ -0.23
Lsm3P62311 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Lsm3P62311 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lsm3P62311 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lsm3P62311 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lsm3P62311 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lsm3P62311 Gm27463-201ENSMUST00000183569 57 ntBASIC13.64□□□□□ -0.23
Lsm3P62311 Gm3375-201ENSMUST00000203929 796 ntBASIC13.64□□□□□ -0.23
Lsm3P62311 Gm7213-201ENSMUST00000215977 950 ntBASIC13.64□□□□□ -0.23
Lsm3P62311 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lsm3P62311 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lsm3P62311 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.64□□□□□ -0.23
Lsm3P62311 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm3P62311 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lsm3P62311 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.63□□□□□ -0.23
Lsm3P62311 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.63□□□□□ -0.23
Lsm3P62311 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lsm3P62311 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Lsm3P62311 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.63□□□□□ -0.23
Lsm3P62311 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.63□□□□□ -0.23
Lsm3P62311 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.63□□□□□ -0.23
Lsm3P62311 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Lsm3P62311 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms