Protein–RNA interactions for Protein: P61406

Smg6, Telomerase-binding protein EST1A, mousemouse

Known RBP Predictions only

Length 1,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg6P61406 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smg6P61406 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smg6P61406 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smg6P61406 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Smg6P61406 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smg6P61406 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smg6P61406 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smg6P61406 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smg6P61406 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Smg6P61406 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smg6P61406 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smg6P61406 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smg6P61406 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC20.53■□□□□ 0.88
Smg6P61406 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC20.53■□□□□ 0.88
Smg6P61406 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.53■□□□□ 0.88
Smg6P61406 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smg6P61406 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.53■□□□□ 0.88
Smg6P61406 Mxra8os-201ENSMUST00000097740 687 ntBASIC20.53■□□□□ 0.88
Smg6P61406 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC20.52■□□□□ 0.88
Smg6P61406 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Smg6P61406 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg6P61406 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
Smg6P61406 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.52■□□□□ 0.87
Smg6P61406 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Smg6P61406 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Smg6P61406 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC20.52■□□□□ 0.87
Smg6P61406 AC025913.2-201ENSMUST00000220136 1766 ntBASIC20.51■□□□□ 0.87
Smg6P61406 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smg6P61406 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smg6P61406 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smg6P61406 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Smg6P61406 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Smg6P61406 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Smg6P61406 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smg6P61406 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smg6P61406 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smg6P61406 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Smg6P61406 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smg6P61406 Gm12134-201ENSMUST00000122109 520 ntBASIC20.51■□□□□ 0.87
Smg6P61406 Gm37171-201ENSMUST00000192636 1185 ntBASIC20.51■□□□□ 0.87
Smg6P61406 Gm5186-201ENSMUST00000218781 920 ntBASIC20.51■□□□□ 0.87
Smg6P61406 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smg6P61406 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC20.51■□□□□ 0.87
Smg6P61406 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smg6P61406 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smg6P61406 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC20.51■□□□□ 0.87
Smg6P61406 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Smg6P61406 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Smg6P61406 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Gm21009-201ENSMUST00000197169 1669 ntBASIC20.5■□□□□ 0.87
Smg6P61406 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.5■□□□□ 0.87
Smg6P61406 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC20.5■□□□□ 0.87
Smg6P61406 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.5■□□□□ 0.87
Smg6P61406 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Smg6P61406 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg6P61406 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smg6P61406 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smg6P61406 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smg6P61406 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smg6P61406 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Smg6P61406 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smg6P61406 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC20.49■□□□□ 0.87
Smg6P61406 AC164567.1-201ENSMUST00000219185 960 ntBASIC20.49■□□□□ 0.87
Smg6P61406 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smg6P61406 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smg6P61406 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Smg6P61406 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
Smg6P61406 Gm12620-201ENSMUST00000119791 1986 ntBASIC20.49■□□□□ 0.87
Smg6P61406 Gm12612-201ENSMUST00000140182 1986 ntBASIC20.49■□□□□ 0.87
Smg6P61406 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smg6P61406 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms