Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cks1bP61025 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.7□□□□□ -0.7
Cks1bP61025 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cks1bP61025 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC10.7□□□□□ -0.7
Cks1bP61025 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC10.7□□□□□ -0.7
Cks1bP61025 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC10.7□□□□□ -0.7
Cks1bP61025 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Cks1bP61025 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Cks1bP61025 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.7□□□□□ -0.7
Cks1bP61025 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.7□□□□□ -0.7
Cks1bP61025 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cks1bP61025 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Gm27528-202ENSMUST00000222916 2012 ntBASIC10.7□□□□□ -0.7
Cks1bP61025 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Cks1bP61025 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cks1bP61025 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cks1bP61025 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1bP61025 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Cks1bP61025 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Cks1bP61025 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Cks1bP61025 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Cks1bP61025 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Cks1bP61025 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.69□□□□□ -0.7
Cks1bP61025 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Spsb2-203ENSMUST00000112473 1322 ntBASIC10.69□□□□□ -0.7
Cks1bP61025 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC10.69□□□□□ -0.7
Cks1bP61025 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cks1bP61025 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Gm10653-202ENSMUST00000139570 835 ntBASIC10.69□□□□□ -0.7
Cks1bP61025 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 AC122351.1-201ENSMUST00000220467 126 ntBASIC10.69□□□□□ -0.7
Cks1bP61025 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.69□□□□□ -0.7
Cks1bP61025 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Cks1bP61025 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.69□□□□□ -0.7
Cks1bP61025 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1bP61025 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1bP61025 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1bP61025 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1bP61025 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1bP61025 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1bP61025 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cks1bP61025 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.68□□□□□ -0.7
Cks1bP61025 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cks1bP61025 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cks1bP61025 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Cks1bP61025 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1bP61025 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms