Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 H2-Pa-201ENSMUST00000182803 626 ntBASIC20.1■□□□□ 0.81
Nphp4P59240 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC20.1■□□□□ 0.81
Nphp4P59240 AC238811.1-201ENSMUST00000225302 441 ntBASIC20.1■□□□□ 0.81
Nphp4P59240 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nphp4P59240 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nphp4P59240 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Gm3365-201ENSMUST00000216296 1480 ntBASIC20.09■□□□□ 0.81
Nphp4P59240 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC20.09■□□□□ 0.81
Nphp4P59240 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Gm7820-201ENSMUST00000121012 1052 ntBASIC20.09■□□□□ 0.81
Nphp4P59240 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC20.09■□□□□ 0.81
Nphp4P59240 Cd63-ps-201ENSMUST00000145417 875 ntBASIC20.09■□□□□ 0.81
Nphp4P59240 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC20.09■□□□□ 0.81
Nphp4P59240 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nphp4P59240 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC20.09■□□□□ 0.81
Nphp4P59240 AA619741-201ENSMUST00000195095 646 ntBASIC20.09■□□□□ 0.81
Nphp4P59240 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Nphp4P59240 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Nphp4P59240 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC20.09■□□□□ 0.81
Nphp4P59240 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nphp4P59240 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nphp4P59240 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nphp4P59240 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nphp4P59240 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nphp4P59240 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nphp4P59240 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nphp4P59240 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nphp4P59240 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nphp4P59240 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nphp4P59240 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nphp4P59240 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nphp4P59240 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Nphp4P59240 Gm44855-201ENSMUST00000205725 362 ntBASIC20.08■□□□□ 0.8
Nphp4P59240 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Nphp4P59240 Gm45751-201ENSMUST00000210185 1573 ntBASIC20.08■□□□□ 0.8
Nphp4P59240 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nphp4P59240 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC20.08■□□□□ 0.8
Nphp4P59240 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nphp4P59240 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nphp4P59240 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nphp4P59240 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nphp4P59240 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Nphp4P59240 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nphp4P59240 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC20.07■□□□□ 0.8
Nphp4P59240 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.07■□□□□ 0.8
Nphp4P59240 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Nphp4P59240 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Nphp4P59240 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Nphp4P59240 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 Gm5763-201ENSMUST00000155951 1530 ntBASIC20.07■□□□□ 0.8
Nphp4P59240 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 Gm4204-201ENSMUST00000110798 1231 ntBASIC20.07■□□□□ 0.8
Nphp4P59240 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC20.07■□□□□ 0.8
Nphp4P59240 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Nphp4P59240 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nphp4P59240 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nphp4P59240 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nphp4P59240 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nphp4P59240 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nphp4P59240 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nphp4P59240 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nphp4P59240 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nphp4P59240 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nphp4P59240 AC124732.1-201ENSMUST00000221551 910 ntBASIC20.06■□□□□ 0.8
Nphp4P59240 Gm9229-201ENSMUST00000222777 126 ntBASIC20.06■□□□□ 0.8
Nphp4P59240 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nphp4P59240 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Nphp4P59240 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nphp4P59240 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nphp4P59240 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nphp4P59240 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nphp4P59240 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nphp4P59240 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms