Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GdnfP48540 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
GdnfP48540 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
GdnfP48540 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GdnfP48540 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
GdnfP48540 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.11□□□□□ -0.31
GdnfP48540 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GdnfP48540 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
GdnfP48540 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.11□□□□□ -0.31
GdnfP48540 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.11□□□□□ -0.31
GdnfP48540 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.11□□□□□ -0.31
GdnfP48540 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.11□□□□□ -0.31
GdnfP48540 Gm7506-201ENSMUST00000207758 815 ntBASIC13.11□□□□□ -0.31
GdnfP48540 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
GdnfP48540 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
GdnfP48540 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
GdnfP48540 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GdnfP48540 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GdnfP48540 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.1□□□□□ -0.31
GdnfP48540 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.1□□□□□ -0.31
GdnfP48540 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
GdnfP48540 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
GdnfP48540 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
GdnfP48540 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.1□□□□□ -0.31
GdnfP48540 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.1□□□□□ -0.31
GdnfP48540 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
GdnfP48540 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
GdnfP48540 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
GdnfP48540 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
GdnfP48540 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
GdnfP48540 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.1□□□□□ -0.31
GdnfP48540 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
GdnfP48540 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GdnfP48540 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
GdnfP48540 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
GdnfP48540 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
GdnfP48540 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.09□□□□□ -0.31
GdnfP48540 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.09□□□□□ -0.31
GdnfP48540 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.09□□□□□ -0.31
GdnfP48540 Gm12644-201ENSMUST00000119935 606 ntBASIC13.09□□□□□ -0.31
GdnfP48540 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
GdnfP48540 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
GdnfP48540 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.09□□□□□ -0.31
GdnfP48540 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.09□□□□□ -0.31
GdnfP48540 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms