Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx1P48377 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.9■□□□□ 0.46
Rfx1P48377 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx1P48377 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx1P48377 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx1P48377 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx1P48377 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.9■□□□□ 0.46
Rfx1P48377 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx1P48377 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx1P48377 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.9■□□□□ 0.46
Rfx1P48377 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rfx1P48377 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rfx1P48377 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rfx1P48377 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Rfx1P48377 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rfx1P48377 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rfx1P48377 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Gm23547-201ENSMUST00000158210 271 ntBASIC17.89■□□□□ 0.45
Rfx1P48377 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Rfx1P48377 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Rfx1P48377 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Rfx1P48377 Gm8318-201ENSMUST00000182954 872 ntBASIC17.89■□□□□ 0.45
Rfx1P48377 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rfx1P48377 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.89■□□□□ 0.45
Rfx1P48377 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.89■□□□□ 0.45
Rfx1P48377 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Rfx1P48377 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx1P48377 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.88■□□□□ 0.45
Rfx1P48377 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.88■□□□□ 0.45
Rfx1P48377 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx1P48377 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rfx1P48377 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.87■□□□□ 0.45
Rfx1P48377 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.87■□□□□ 0.45
Rfx1P48377 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.87■□□□□ 0.45
Rfx1P48377 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.87■□□□□ 0.45
Rfx1P48377 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Rfx1P48377 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.87■□□□□ 0.45
Rfx1P48377 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx1P48377 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx1P48377 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx1P48377 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx1P48377 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx1P48377 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx1P48377 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.86■□□□□ 0.45
Rfx1P48377 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.86■□□□□ 0.45
Rfx1P48377 AA414768-201ENSMUST00000121924 1257 ntBASIC17.86■□□□□ 0.45
Rfx1P48377 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx1P48377 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx1P48377 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx1P48377 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.86■□□□□ 0.45
Rfx1P48377 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx1P48377 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rfx1P48377 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx1P48377 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx1P48377 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx1P48377 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms