Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.17■□□□□ 0.02
Vps4bP46467 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Vps4bP46467 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Vps4bP46467 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.16■□□□□ 0.02
Vps4bP46467 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps4bP46467 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps4bP46467 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps4bP46467 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps4bP46467 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Vps4bP46467 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vps4bP46467 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps4bP46467 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps4bP46467 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vps4bP46467 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps4bP46467 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.16■□□□□ 0.02
Vps4bP46467 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps4bP46467 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Vps4bP46467 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vps4bP46467 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps4bP46467 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps4bP46467 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Vps4bP46467 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vps4bP46467 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.16■□□□□ 0.02
Vps4bP46467 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vps4bP46467 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vps4bP46467 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps4bP46467 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vps4bP46467 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.15■□□□□ 0.02
Vps4bP46467 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps4bP46467 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Gm44357-201ENSMUST00000195897 142 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Gm19658-201ENSMUST00000196231 138 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Gm44367-201ENSMUST00000196836 138 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Gm44350-201ENSMUST00000197197 138 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Gm44390-201ENSMUST00000197533 144 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Gm44313-201ENSMUST00000198018 138 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Gm44486-201ENSMUST00000198508 138 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Gm44314-201ENSMUST00000199263 138 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Gm44394-201ENSMUST00000199558 138 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Gm44484-201ENSMUST00000199873 138 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Gm44466-201ENSMUST00000200264 138 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Gm44359-201ENSMUST00000200671 138 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.15■□□□□ 0.02
Vps4bP46467 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps4bP46467 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.15■□□□□ 0.02
Vps4bP46467 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps4bP46467 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Vps4bP46467 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vps4bP46467 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps4bP46467 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vps4bP46467 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps4bP46467 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 Gm25990-201ENSMUST00000102440 86 ntBASIC15.14■□□□□ 0.01
Vps4bP46467 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 Gm7222-201ENSMUST00000117512 906 ntBASIC15.14■□□□□ 0.01
Vps4bP46467 Gm12134-201ENSMUST00000122109 520 ntBASIC15.14■□□□□ 0.01
Vps4bP46467 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.14■□□□□ 0.01
Vps4bP46467 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps4bP46467 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps4bP46467 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.14■□□□□ 0.01
Vps4bP46467 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.14■□□□□ 0.01
Vps4bP46467 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms