Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Gm26039-201ENSMUST00000158152 144 ntBASIC12.58□□□□□ -0.4
Mmp9P41245 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.58□□□□□ -0.4
Mmp9P41245 Gm5587-201ENSMUST00000206270 674 ntBASIC12.58□□□□□ -0.4
Mmp9P41245 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp9P41245 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp9P41245 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp9P41245 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.58□□□□□ -0.4
Mmp9P41245 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.58□□□□□ -0.4
Mmp9P41245 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp9P41245 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp9P41245 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Mmp9P41245 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Mmp9P41245 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Mmp9P41245 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Mmp9P41245 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.57□□□□□ -0.4
Mmp9P41245 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Mmp9P41245 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Mmp9P41245 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.57□□□□□ -0.4
Mmp9P41245 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.57□□□□□ -0.4
Mmp9P41245 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Mmp9P41245 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Mmp9P41245 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.57□□□□□ -0.4
Mmp9P41245 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.57□□□□□ -0.4
Mmp9P41245 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Mmp9P41245 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Mmp9P41245 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Mmp9P41245 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp9P41245 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Mmp9P41245 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Mmp9P41245 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Mmp9P41245 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Mmp9P41245 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Mmp9P41245 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.56□□□□□ -0.4
Mmp9P41245 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Mmp9P41245 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Mmp9P41245 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Mmp9P41245 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Mmp9P41245 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Mmp9P41245 Gm9013-201ENSMUST00000132939 882 ntBASIC12.56□□□□□ -0.4
Mmp9P41245 Gm25925-201ENSMUST00000158314 306 ntBASIC12.56□□□□□ -0.4
Mmp9P41245 Mir1668-201ENSMUST00000184114 107 ntBASIC12.56□□□□□ -0.4
Mmp9P41245 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.56□□□□□ -0.4
Mmp9P41245 Gm21559-201ENSMUST00000220638 855 ntBASIC12.56□□□□□ -0.4
Mmp9P41245 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.56□□□□□ -0.4
Mmp9P41245 Mzt1-203ENSMUST00000227948 952 ntBASIC12.56□□□□□ -0.4
Mmp9P41245 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Gm8587-201ENSMUST00000076538 843 ntBASIC12.56□□□□□ -0.4
Mmp9P41245 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Mmp9P41245 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.56□□□□□ -0.4
Mmp9P41245 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Mmp9P41245 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Mmp9P41245 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp9P41245 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Mmp9P41245 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp9P41245 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp9P41245 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.55□□□□□ -0.4
Mmp9P41245 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp9P41245 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Mmp9P41245 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp9P41245 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Mmp9P41245 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp9P41245 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp9P41245 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp9P41245 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms