Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.88□□□□□ -0.03
LdlrP35951 Gm27702-201ENSMUST00000184512 56 ntBASIC14.88□□□□□ -0.03
LdlrP35951 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Psmb5-202ENSMUST00000227257 622 ntBASIC14.88□□□□□ -0.03
LdlrP35951 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.88□□□□□ -0.03
LdlrP35951 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LdlrP35951 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.87□□□□□ -0.03
LdlrP35951 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.87□□□□□ -0.03
LdlrP35951 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.87□□□□□ -0.03
LdlrP35951 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LdlrP35951 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
LdlrP35951 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.87□□□□□ -0.03
LdlrP35951 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LdlrP35951 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LdlrP35951 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.87□□□□□ -0.03
LdlrP35951 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LdlrP35951 Gm23547-201ENSMUST00000158210 271 ntBASIC14.87□□□□□ -0.03
LdlrP35951 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LdlrP35951 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.87□□□□□ -0.03
LdlrP35951 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.87□□□□□ -0.03
LdlrP35951 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.87□□□□□ -0.03
LdlrP35951 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.87□□□□□ -0.03
LdlrP35951 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.87□□□□□ -0.03
LdlrP35951 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LdlrP35951 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LdlrP35951 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LdlrP35951 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LdlrP35951 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LdlrP35951 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LdlrP35951 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LdlrP35951 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LdlrP35951 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LdlrP35951 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LdlrP35951 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LdlrP35951 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
LdlrP35951 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.87□□□□□ -0.03
LdlrP35951 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.87□□□□□ -0.03
LdlrP35951 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LdlrP35951 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LdlrP35951 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.87□□□□□ -0.03
LdlrP35951 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LdlrP35951 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.86□□□□□ -0.03
LdlrP35951 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.86□□□□□ -0.03
LdlrP35951 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
LdlrP35951 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LdlrP35951 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LdlrP35951 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LdlrP35951 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.86□□□□□ -0.03
LdlrP35951 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.86□□□□□ -0.03
LdlrP35951 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.86□□□□□ -0.03
LdlrP35951 Gm6736-201ENSMUST00000166583 948 ntBASIC14.86□□□□□ -0.03
LdlrP35951 Gm25745-201ENSMUST00000174945 133 ntBASIC14.86□□□□□ -0.03
LdlrP35951 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.86□□□□□ -0.03
LdlrP35951 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.86□□□□□ -0.03
LdlrP35951 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Carlr-201ENSMUST00000181515 2574 ntBASIC14.86□□□□□ -0.03
LdlrP35951 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LdlrP35951 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.86□□□□□ -0.03
LdlrP35951 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.86□□□□□ -0.03
LdlrP35951 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LdlrP35951 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.85□□□□□ -0.03
LdlrP35951 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms