Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a11P31650 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Slc6a11P31650 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a11P31650 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Slc6a11P31650 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a11P31650 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a11P31650 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Slc6a11P31650 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a11P31650 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a11P31650 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.21□□□□□ -0.14
Slc6a11P31650 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a11P31650 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a11P31650 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a11P31650 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Slc6a11P31650 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Slc6a11P31650 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.21□□□□□ -0.14
Slc6a11P31650 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a11P31650 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a11P31650 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Slc6a11P31650 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Slc6a11P31650 Gm25990-201ENSMUST00000102440 86 ntBASIC14.2□□□□□ -0.14
Slc6a11P31650 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.2□□□□□ -0.14
Slc6a11P31650 Gm4535-201ENSMUST00000182274 558 ntBASIC14.2□□□□□ -0.14
Slc6a11P31650 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
Slc6a11P31650 Gm10576-201ENSMUST00000191927 825 ntBASIC14.2□□□□□ -0.14
Slc6a11P31650 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.2□□□□□ -0.14
Slc6a11P31650 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Gm10355-201ENSMUST00000097146 517 ntBASIC14.2□□□□□ -0.14
Slc6a11P31650 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Slc6a11P31650 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Slc6a11P31650 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Slc6a11P31650 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Slc6a11P31650 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a11P31650 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.19□□□□□ -0.14
Slc6a11P31650 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Gm23935-201ENSMUST00000102303 57 ntBASIC14.19□□□□□ -0.14
Slc6a11P31650 Gm24270-201ENSMUST00000102326 57 ntBASIC14.19□□□□□ -0.14
Slc6a11P31650 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Slc6a11P31650 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.19□□□□□ -0.14
Slc6a11P31650 Gm24245-201ENSMUST00000157318 57 ntBASIC14.19□□□□□ -0.14
Slc6a11P31650 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.19□□□□□ -0.14
Slc6a11P31650 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.19□□□□□ -0.14
Slc6a11P31650 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.19□□□□□ -0.14
Slc6a11P31650 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Slc6a11P31650 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.19□□□□□ -0.14
Slc6a11P31650 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.19□□□□□ -0.14
Slc6a11P31650 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Slc6a11P31650 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.19□□□□□ -0.14
Slc6a11P31650 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.19□□□□□ -0.14
Slc6a11P31650 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Slc6a11P31650 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a11P31650 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.18□□□□□ -0.14
Slc6a11P31650 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a11P31650 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a11P31650 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a11P31650 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Slc6a11P31650 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a11P31650 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a11P31650 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a11P31650 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a11P31650 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a11P31650 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.18□□□□□ -0.14
Slc6a11P31650 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a11P31650 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a11P31650 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a11P31650 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Slc6a11P31650 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms