Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.84□□□□□ -0.19
Nedd8P29595 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nedd8P29595 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Nedd8P29595 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nedd8P29595 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nedd8P29595 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nedd8P29595 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nedd8P29595 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.84□□□□□ -0.19
Nedd8P29595 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nedd8P29595 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nedd8P29595 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nedd8P29595 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.84□□□□□ -0.19
Nedd8P29595 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Nedd8P29595 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Nedd8P29595 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nedd8P29595 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nedd8P29595 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nedd8P29595 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nedd8P29595 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.84□□□□□ -0.19
Nedd8P29595 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nedd8P29595 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nedd8P29595 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nedd8P29595 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nedd8P29595 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Nedd8P29595 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nedd8P29595 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nedd8P29595 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nedd8P29595 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nedd8P29595 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nedd8P29595 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.83□□□□□ -0.19
Nedd8P29595 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nedd8P29595 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Nedd8P29595 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Nedd8P29595 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nedd8P29595 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.83□□□□□ -0.2
Nedd8P29595 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Nedd8P29595 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nedd8P29595 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nedd8P29595 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nedd8P29595 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nedd8P29595 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nedd8P29595 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nedd8P29595 Mir1199-201ENSMUST00000117015 119 ntBASIC13.83□□□□□ -0.2
Nedd8P29595 Gm5643-201ENSMUST00000117081 966 ntBASIC13.83□□□□□ -0.2
Nedd8P29595 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Nedd8P29595 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.83□□□□□ -0.2
Nedd8P29595 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nedd8P29595 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.83□□□□□ -0.2
Nedd8P29595 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nedd8P29595 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nedd8P29595 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nedd8P29595 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nedd8P29595 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nedd8P29595 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Nedd8P29595 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nedd8P29595 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nedd8P29595 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nedd8P29595 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.82□□□□□ -0.2
Nedd8P29595 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nedd8P29595 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
Nedd8P29595 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nedd8P29595 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.82□□□□□ -0.2
Nedd8P29595 Gm10052-201ENSMUST00000168019 960 ntBASIC13.82□□□□□ -0.2
Nedd8P29595 Gm18284-201ENSMUST00000172604 624 ntBASIC13.82□□□□□ -0.2
Nedd8P29595 Gm27463-201ENSMUST00000183569 57 ntBASIC13.82□□□□□ -0.2
Nedd8P29595 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.82□□□□□ -0.2
Nedd8P29595 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.82□□□□□ -0.2
Nedd8P29595 Gm7729-201ENSMUST00000050143 801 ntBASIC13.82□□□□□ -0.2
Nedd8P29595 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nedd8P29595 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nedd8P29595 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.82□□□□□ -0.2
Nedd8P29595 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nedd8P29595 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nedd8P29595 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nedd8P29595 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nedd8P29595 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nedd8P29595 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nedd8P29595 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms