Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Vcam1P29533 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcam1P29533 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.11■□□□□ 0.33
Vcam1P29533 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.11■□□□□ 0.33
Vcam1P29533 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Vcam1P29533 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.11■□□□□ 0.33
Vcam1P29533 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vcam1P29533 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.11■□□□□ 0.33
Vcam1P29533 Gm23547-201ENSMUST00000158210 271 ntBASIC17.11■□□□□ 0.33
Vcam1P29533 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.11■□□□□ 0.33
Vcam1P29533 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vcam1P29533 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Vcam1P29533 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.11■□□□□ 0.33
Vcam1P29533 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vcam1P29533 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vcam1P29533 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcam1P29533 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vcam1P29533 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vcam1P29533 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vcam1P29533 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Vcam1P29533 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vcam1P29533 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vcam1P29533 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.1■□□□□ 0.33
Vcam1P29533 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.1■□□□□ 0.33
Vcam1P29533 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcam1P29533 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.1■□□□□ 0.33
Vcam1P29533 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcam1P29533 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vcam1P29533 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.1■□□□□ 0.33
Vcam1P29533 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcam1P29533 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vcam1P29533 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vcam1P29533 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcam1P29533 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vcam1P29533 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.09■□□□□ 0.33
Vcam1P29533 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.09■□□□□ 0.33
Vcam1P29533 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.09■□□□□ 0.33
Vcam1P29533 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.09■□□□□ 0.33
Vcam1P29533 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.09■□□□□ 0.33
Vcam1P29533 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.09■□□□□ 0.33
Vcam1P29533 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.09■□□□□ 0.33
Vcam1P29533 Gm16476-201ENSMUST00000221544 139 ntBASIC17.09■□□□□ 0.33
Vcam1P29533 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vcam1P29533 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Vcam1P29533 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.09■□□□□ 0.33
Vcam1P29533 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.09■□□□□ 0.33
Vcam1P29533 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vcam1P29533 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcam1P29533 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vcam1P29533 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vcam1P29533 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vcam1P29533 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vcam1P29533 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Vcam1P29533 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vcam1P29533 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcam1P29533 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Vcam1P29533 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcam1P29533 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms