Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.32■□□□□ 0.36
Pde6aP27664 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.31■□□□□ 0.36
Pde6aP27664 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6aP27664 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6aP27664 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pde6aP27664 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6aP27664 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pde6aP27664 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6aP27664 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.31■□□□□ 0.36
Pde6aP27664 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pde6aP27664 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.31■□□□□ 0.36
Pde6aP27664 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.31■□□□□ 0.36
Pde6aP27664 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.31■□□□□ 0.36
Pde6aP27664 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6aP27664 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6aP27664 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6aP27664 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.31■□□□□ 0.36
Pde6aP27664 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6aP27664 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6aP27664 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6aP27664 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6aP27664 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6aP27664 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6aP27664 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.3■□□□□ 0.36
Pde6aP27664 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.3■□□□□ 0.36
Pde6aP27664 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pde6aP27664 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.3■□□□□ 0.36
Pde6aP27664 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6aP27664 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Pde6aP27664 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pde6aP27664 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pde6aP27664 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.29■□□□□ 0.36
Pde6aP27664 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.29■□□□□ 0.36
Pde6aP27664 Gm45612-201ENSMUST00000211320 160 ntBASIC17.29■□□□□ 0.36
Pde6aP27664 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Pde6aP27664 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pde6aP27664 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Pde6aP27664 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.29■□□□□ 0.36
Pde6aP27664 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6aP27664 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pde6aP27664 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.28■□□□□ 0.36
Pde6aP27664 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.28■□□□□ 0.36
Pde6aP27664 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.28■□□□□ 0.36
Pde6aP27664 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pde6aP27664 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Gm11025-201ENSMUST00000140773 466 ntBASIC17.28■□□□□ 0.36
Pde6aP27664 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms