Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cd40lgP27548 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cd40lgP27548 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.81□□□□□ -0.2
Cd40lgP27548 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cd40lgP27548 Asic1-205ENSMUST00000228185 1818 ntBASIC13.8□□□□□ -0.2
Cd40lgP27548 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.8□□□□□ -0.2
Cd40lgP27548 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cd40lgP27548 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cd40lgP27548 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Cd40lgP27548 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.8□□□□□ -0.2
Cd40lgP27548 Gm8000-201ENSMUST00000188378 592 ntBASIC13.8□□□□□ -0.2
Cd40lgP27548 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cd40lgP27548 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.8□□□□□ -0.2
Cd40lgP27548 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.8□□□□□ -0.2
Cd40lgP27548 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cd40lgP27548 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.8□□□□□ -0.2
Cd40lgP27548 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.8□□□□□ -0.2
Cd40lgP27548 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cd40lgP27548 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cd40lgP27548 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.79□□□□□ -0.2
Cd40lgP27548 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.79□□□□□ -0.2
Cd40lgP27548 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.79□□□□□ -0.2
Cd40lgP27548 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cd40lgP27548 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cd40lgP27548 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.79□□□□□ -0.2
Cd40lgP27548 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cd40lgP27548 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd40lgP27548 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cd40lgP27548 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.78□□□□□ -0.2
Cd40lgP27548 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cd40lgP27548 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.78□□□□□ -0.2
Cd40lgP27548 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cd40lgP27548 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.78□□□□□ -0.2
Cd40lgP27548 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms