Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NdnP25233 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NdnP25233 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NdnP25233 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NdnP25233 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NdnP25233 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NdnP25233 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.03□□□□□ -0.48
NdnP25233 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.03□□□□□ -0.48
NdnP25233 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NdnP25233 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
NdnP25233 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
NdnP25233 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NdnP25233 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.48
NdnP25233 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NdnP25233 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NdnP25233 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
NdnP25233 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
NdnP25233 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NdnP25233 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NdnP25233 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
NdnP25233 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NdnP25233 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
NdnP25233 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
NdnP25233 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NdnP25233 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
NdnP25233 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
NdnP25233 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NdnP25233 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.02□□□□□ -0.49
NdnP25233 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NdnP25233 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NdnP25233 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.02□□□□□ -0.49
NdnP25233 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.02□□□□□ -0.49
NdnP25233 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.02□□□□□ -0.49
NdnP25233 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.02□□□□□ -0.49
NdnP25233 Odf3b-204ENSMUST00000227834 930 ntBASIC12.02□□□□□ -0.49
NdnP25233 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NdnP25233 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
NdnP25233 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NdnP25233 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NdnP25233 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NdnP25233 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NdnP25233 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NdnP25233 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.02□□□□□ -0.49
NdnP25233 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NdnP25233 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NdnP25233 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.02□□□□□ -0.49
NdnP25233 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NdnP25233 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NdnP25233 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
NdnP25233 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NdnP25233 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NdnP25233 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
NdnP25233 Acot6-202ENSMUST00000222921 3622 ntBASIC12.01□□□□□ -0.49
NdnP25233 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NdnP25233 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NdnP25233 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NdnP25233 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NdnP25233 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
NdnP25233 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NdnP25233 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NdnP25233 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
NdnP25233 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NdnP25233 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.01□□□□□ -0.49
NdnP25233 Mir1199-201ENSMUST00000117015 119 ntBASIC12.01□□□□□ -0.49
NdnP25233 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.01□□□□□ -0.49
NdnP25233 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.01□□□□□ -0.49
NdnP25233 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.01□□□□□ -0.49
NdnP25233 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.01□□□□□ -0.49
NdnP25233 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
NdnP25233 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NdnP25233 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
NdnP25233 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NdnP25233 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NdnP25233 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NdnP25233 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NdnP25233 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12□□□□□ -0.49
NdnP25233 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NdnP25233 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12□□□□□ -0.49
NdnP25233 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
NdnP25233 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms