Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfrsf1bP25119 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Gm16198-201ENSMUST00000118766 670 ntBASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Gm2272-201ENSMUST00000194903 582 ntBASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfrsf1bP25119 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfrsf1bP25119 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfrsf1bP25119 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfrsf1bP25119 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfrsf1bP25119 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Gm27301-201ENSMUST00000184012 127 ntBASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Gm10175-201ENSMUST00000086013 645 ntBASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfrsf1bP25119 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Gm2213-201ENSMUST00000197485 688 ntBASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms