Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Ccl1P10146 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccl1P10146 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.62□□□□□ -0.55
Ccl1P10146 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccl1P10146 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccl1P10146 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccl1P10146 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.62□□□□□ -0.55
Ccl1P10146 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.62□□□□□ -0.55
Ccl1P10146 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ccl1P10146 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ccl1P10146 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl1P10146 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ccl1P10146 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.61□□□□□ -0.55
Ccl1P10146 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccl1P10146 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ccl1P10146 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccl1P10146 Carlr-201ENSMUST00000181515 2574 ntBASIC11.61□□□□□ -0.55
Ccl1P10146 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ccl1P10146 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Ccl1P10146 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Mir1668-201ENSMUST00000184114 107 ntBASIC11.61□□□□□ -0.55
Ccl1P10146 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.61□□□□□ -0.55
Ccl1P10146 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccl1P10146 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Ccl1P10146 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl1P10146 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ccl1P10146 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ccl1P10146 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.6□□□□□ -0.55
Ccl1P10146 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccl1P10146 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.6□□□□□ -0.55
Ccl1P10146 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Ccl1P10146 Gm12008-201ENSMUST00000117791 755 ntBASIC11.6□□□□□ -0.55
Ccl1P10146 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.6□□□□□ -0.55
Ccl1P10146 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.6□□□□□ -0.55
Ccl1P10146 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ccl1P10146 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.6□□□□□ -0.55
Ccl1P10146 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.6□□□□□ -0.55
Ccl1P10146 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccl1P10146 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ccl1P10146 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms