Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Zfp28P10078 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.8□□□□□ -0.2
Zfp28P10078 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Zfp28P10078 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Zfp28P10078 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.8□□□□□ -0.2
Zfp28P10078 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.8□□□□□ -0.2
Zfp28P10078 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.8□□□□□ -0.2
Zfp28P10078 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Zfp28P10078 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Zfp28P10078 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Zfp28P10078 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Zfp28P10078 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Zfp28P10078 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Zfp28P10078 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Zfp28P10078 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Zfp28P10078 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.79□□□□□ -0.2
Zfp28P10078 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Zfp28P10078 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.79□□□□□ -0.2
Zfp28P10078 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Zfp28P10078 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.79□□□□□ -0.2
Zfp28P10078 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.79□□□□□ -0.2
Zfp28P10078 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Zfp28P10078 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.79□□□□□ -0.2
Zfp28P10078 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Zfp28P10078 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Zfp28P10078 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Zfp28P10078 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.78□□□□□ -0.2
Zfp28P10078 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.78□□□□□ -0.2
Zfp28P10078 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.78□□□□□ -0.2
Zfp28P10078 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.78□□□□□ -0.2
Zfp28P10078 Gm19164-201ENSMUST00000210667 640 ntBASIC13.78□□□□□ -0.2
Zfp28P10078 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.78□□□□□ -0.2
Zfp28P10078 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Zfp28P10078 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Zfp28P10078 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Zfp28P10078 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.78□□□□□ -0.2
Zfp28P10078 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Zfp28P10078 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Zfp28P10078 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Zfp28P10078 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Zfp28P10078 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Zfp28P10078 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zfp28P10078 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zfp28P10078 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.77□□□□□ -0.21
Zfp28P10078 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zfp28P10078 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.77□□□□□ -0.21
Zfp28P10078 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zfp28P10078 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zfp28P10078 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Zfp28P10078 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Zfp28P10078 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.77□□□□□ -0.21
Zfp28P10078 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Zfp28P10078 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.77□□□□□ -0.21
Zfp28P10078 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zfp28P10078 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Zfp28P10078 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.77□□□□□ -0.21
Zfp28P10078 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.77□□□□□ -0.21
Zfp28P10078 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zfp28P10078 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.77□□□□□ -0.21
Zfp28P10078 Gm44454-201ENSMUST00000198541 138 ntBASIC13.77□□□□□ -0.21
Zfp28P10078 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms