Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chrna1P04756 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chrna1P04756 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Chrna1P04756 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chrna1P04756 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.02■□□□□ 0.15
Chrna1P04756 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chrna1P04756 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Chrna1P04756 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.02■□□□□ 0.15
Chrna1P04756 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.01■□□□□ 0.15
Chrna1P04756 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Chrna1P04756 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Chrna1P04756 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Chrna1P04756 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
Chrna1P04756 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Chrna1P04756 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Chrna1P04756 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Chrna1P04756 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna1P04756 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Chrna1P04756 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16■□□□□ 0.15
Chrna1P04756 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16■□□□□ 0.15
Chrna1P04756 Trav13-3-201ENSMUST00000117226 336 ntBASIC16■□□□□ 0.15
Chrna1P04756 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16■□□□□ 0.15
Chrna1P04756 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16■□□□□ 0.15
Chrna1P04756 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16■□□□□ 0.15
Chrna1P04756 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Chrna1P04756 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Chrna1P04756 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna1P04756 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Chrna1P04756 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Asic1-205ENSMUST00000228185 1818 ntBASIC15.99■□□□□ 0.15
Chrna1P04756 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Chrna1P04756 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Chrna1P04756 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.99■□□□□ 0.15
Chrna1P04756 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Chrna1P04756 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Chrna1P04756 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.99■□□□□ 0.15
Chrna1P04756 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.99■□□□□ 0.15
Chrna1P04756 Gm28630-201ENSMUST00000187806 498 ntBASIC15.99■□□□□ 0.15
Chrna1P04756 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.99■□□□□ 0.15
Chrna1P04756 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Chrna1P04756 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Chrna1P04756 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Chrna1P04756 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Chrna1P04756 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna1P04756 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.99■□□□□ 0.15
Chrna1P04756 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms