Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxa3P02831 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxa3P02831 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.54□□□□□ -0.4
Hoxa3P02831 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxa3P02831 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Hoxa3P02831 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hoxa3P02831 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxa3P02831 Gm10499-201ENSMUST00000174094 934 ntBASIC12.54□□□□□ -0.4
Hoxa3P02831 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.54□□□□□ -0.4
Hoxa3P02831 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxa3P02831 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hoxa3P02831 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.54□□□□□ -0.4
Hoxa3P02831 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Gm15427-201ENSMUST00000117288 531 ntBASIC12.53□□□□□ -0.4
Hoxa3P02831 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.53□□□□□ -0.4
Hoxa3P02831 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxa3P02831 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa3P02831 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxa3P02831 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxa3P02831 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxa3P02831 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxa3P02831 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxa3P02831 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.52□□□□□ -0.4
Hoxa3P02831 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxa3P02831 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.52□□□□□ -0.4
Hoxa3P02831 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.52□□□□□ -0.4
Hoxa3P02831 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxa3P02831 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Hoxa3P02831 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hoxa3P02831 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa3P02831 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa3P02831 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxa3P02831 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hoxa3P02831 Gm20553-201ENSMUST00000204205 844 ntBASIC12.52□□□□□ -0.41
Hoxa3P02831 Thap2-203ENSMUST00000218989 527 ntBASIC12.52□□□□□ -0.41
Hoxa3P02831 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.52□□□□□ -0.41
Hoxa3P02831 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa3P02831 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa3P02831 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa3P02831 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.52□□□□□ -0.41
Hoxa3P02831 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.52□□□□□ -0.41
Hoxa3P02831 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.52□□□□□ -0.41
Hoxa3P02831 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa3P02831 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa3P02831 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa3P02831 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxa3P02831 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms