Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Col4a1P02463 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.15■□□□□ 0.5
Col4a1P02463 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.15■□□□□ 0.5
Col4a1P02463 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.15■□□□□ 0.5
Col4a1P02463 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Col4a1P02463 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a1P02463 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Col4a1P02463 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a1P02463 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a1P02463 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Col4a1P02463 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a1P02463 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Col4a1P02463 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a1P02463 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a1P02463 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a1P02463 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a1P02463 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.14■□□□□ 0.49
Col4a1P02463 Gm9908-201ENSMUST00000211534 448 ntBASIC18.14■□□□□ 0.49
Col4a1P02463 Gm18624-201ENSMUST00000220966 658 ntBASIC18.14■□□□□ 0.49
Col4a1P02463 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a1P02463 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a1P02463 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a1P02463 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a1P02463 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.14■□□□□ 0.49
Col4a1P02463 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a1P02463 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a1P02463 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Col4a1P02463 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC18.13■□□□□ 0.49
Col4a1P02463 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Col4a1P02463 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a1P02463 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Col4a1P02463 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a1P02463 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Col4a1P02463 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a1P02463 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a1P02463 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Col4a1P02463 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a1P02463 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a1P02463 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.13■□□□□ 0.49
Col4a1P02463 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a1P02463 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Col4a1P02463 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a1P02463 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a1P02463 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.13■□□□□ 0.49
Col4a1P02463 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a1P02463 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col4a1P02463 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.12■□□□□ 0.49
Col4a1P02463 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Gm8515-201ENSMUST00000194852 576 ntBASIC18.12■□□□□ 0.49
Col4a1P02463 Gm9797-201ENSMUST00000052902 613 ntBASIC18.12■□□□□ 0.49
Col4a1P02463 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col4a1P02463 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.12■□□□□ 0.49
Col4a1P02463 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.12■□□□□ 0.49
Col4a1P02463 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.12■□□□□ 0.49
Col4a1P02463 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.12■□□□□ 0.49
Col4a1P02463 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.12■□□□□ 0.49
Col4a1P02463 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC18.12■□□□□ 0.49
Col4a1P02463 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.12■□□□□ 0.49
Col4a1P02463 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Gm45384-201ENSMUST00000210451 277 ntBASIC18.12■□□□□ 0.49
Col4a1P02463 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.12■□□□□ 0.49
Col4a1P02463 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a1P02463 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.12■□□□□ 0.49
Col4a1P02463 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a1P02463 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Col4a1P02463 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a1P02463 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms