Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
H3f3cP02301 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.84□□□□□ -0.35
H3f3cP02301 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3cP02301 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3cP02301 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3cP02301 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
H3f3cP02301 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H3f3cP02301 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
H3f3cP02301 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
H3f3cP02301 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.83□□□□□ -0.36
H3f3cP02301 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
H3f3cP02301 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
H3f3cP02301 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
H3f3cP02301 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
H3f3cP02301 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.83□□□□□ -0.36
H3f3cP02301 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3cP02301 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
H3f3cP02301 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.82□□□□□ -0.36
H3f3cP02301 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
H3f3cP02301 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.82□□□□□ -0.36
H3f3cP02301 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.82□□□□□ -0.36
H3f3cP02301 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.82□□□□□ -0.36
H3f3cP02301 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.82□□□□□ -0.36
H3f3cP02301 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.82□□□□□ -0.36
H3f3cP02301 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.82□□□□□ -0.36
H3f3cP02301 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.82□□□□□ -0.36
H3f3cP02301 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H3f3cP02301 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H3f3cP02301 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
H3f3cP02301 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H3f3cP02301 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3cP02301 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
H3f3cP02301 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.81□□□□□ -0.36
H3f3cP02301 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
H3f3cP02301 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.81□□□□□ -0.36
H3f3cP02301 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H3f3cP02301 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
H3f3cP02301 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.81□□□□□ -0.36
H3f3cP02301 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.81□□□□□ -0.36
H3f3cP02301 Gm6443-201ENSMUST00000203599 874 ntBASIC12.81□□□□□ -0.36
H3f3cP02301 Gm5364-201ENSMUST00000216789 889 ntBASIC12.81□□□□□ -0.36
H3f3cP02301 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.81□□□□□ -0.36
H3f3cP02301 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
H3f3cP02301 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H3f3cP02301 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3cP02301 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms