Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Hbb-b1P02088 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.55□□□□□ -0.72
Hbb-b1P02088 Gm29707-201ENSMUST00000196325 491 ntBASIC10.55□□□□□ -0.72
Hbb-b1P02088 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.55□□□□□ -0.72
Hbb-b1P02088 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.55□□□□□ -0.72
Hbb-b1P02088 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hbb-b1P02088 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Dio3-201ENSMUST00000097228 1449 ntBASIC10.54□□□□□ -0.72
Hbb-b1P02088 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hbb-b1P02088 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms