Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Best1O88870 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Best1O88870 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Best1O88870 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Best1O88870 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Best1O88870 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Best1O88870 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Best1O88870 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Best1O88870 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Best1O88870 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Best1O88870 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.33□□□□□ -0.12
Best1O88870 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Best1O88870 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Best1O88870 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.32□□□□□ -0.12
Best1O88870 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Best1O88870 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Best1O88870 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Gm9182-201ENSMUST00000217829 639 ntBASIC14.32□□□□□ -0.12
Best1O88870 Gm5779-201ENSMUST00000218467 910 ntBASIC14.32□□□□□ -0.12
Best1O88870 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.32□□□□□ -0.12
Best1O88870 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Best1O88870 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Best1O88870 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Best1O88870 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Best1O88870 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.31□□□□□ -0.12
Best1O88870 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.31□□□□□ -0.12
Best1O88870 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Best1O88870 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.31□□□□□ -0.12
Best1O88870 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.31□□□□□ -0.12
Best1O88870 Gm13015-201ENSMUST00000118674 204 ntBASIC14.31□□□□□ -0.12
Best1O88870 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 AA543401-201ENSMUST00000164248 1269 ntBASIC14.31□□□□□ -0.12
Best1O88870 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.31□□□□□ -0.12
Best1O88870 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Best1O88870 Gm9726-201ENSMUST00000180321 678 ntBASIC14.31□□□□□ -0.12
Best1O88870 Olfr286-202ENSMUST00000205305 969 ntBASIC14.31□□□□□ -0.12
Best1O88870 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.31□□□□□ -0.12
Best1O88870 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Best1O88870 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Best1O88870 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms