Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.34□□□□□ -0.11
Hcn3O88705 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Hcn3O88705 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hcn3O88705 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.33□□□□□ -0.11
Hcn3O88705 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hcn3O88705 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hcn3O88705 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Hcn3O88705 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hcn3O88705 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.33□□□□□ -0.12
Hcn3O88705 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hcn3O88705 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.33□□□□□ -0.12
Hcn3O88705 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.33□□□□□ -0.12
Hcn3O88705 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.33□□□□□ -0.12
Hcn3O88705 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Hcn3O88705 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hcn3O88705 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn3O88705 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.32□□□□□ -0.12
Hcn3O88705 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hcn3O88705 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.32□□□□□ -0.12
Hcn3O88705 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.32□□□□□ -0.12
Hcn3O88705 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Hcn3O88705 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Hcn3O88705 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Hcn3O88705 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.32□□□□□ -0.12
Hcn3O88705 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Hcn3O88705 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn3O88705 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.31□□□□□ -0.12
Hcn3O88705 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hcn3O88705 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hcn3O88705 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hcn3O88705 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.31□□□□□ -0.12
Hcn3O88705 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.31□□□□□ -0.12
Hcn3O88705 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.31□□□□□ -0.12
Hcn3O88705 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hcn3O88705 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.31□□□□□ -0.12
Hcn3O88705 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hcn3O88705 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn3O88705 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms