Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cldn1O88551 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
Cldn1O88551 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.83□□□□□ -0.35
Cldn1O88551 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldn1O88551 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldn1O88551 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cldn1O88551 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cldn1O88551 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cldn1O88551 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Cldn1O88551 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.83□□□□□ -0.36
Cldn1O88551 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldn1O88551 Gm27306-201ENSMUST00000183970 107 ntBASIC12.83□□□□□ -0.36
Cldn1O88551 Gm27989-201ENSMUST00000184721 107 ntBASIC12.83□□□□□ -0.36
Cldn1O88551 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Gm17837-201ENSMUST00000186435 985 ntBASIC12.83□□□□□ -0.36
Cldn1O88551 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.83□□□□□ -0.36
Cldn1O88551 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.83□□□□□ -0.36
Cldn1O88551 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cldn1O88551 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cldn1O88551 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldn1O88551 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.83□□□□□ -0.36
Cldn1O88551 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cldn1O88551 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn1O88551 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.82□□□□□ -0.36
Cldn1O88551 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.82□□□□□ -0.36
Cldn1O88551 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cldn1O88551 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.82□□□□□ -0.36
Cldn1O88551 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.82□□□□□ -0.36
Cldn1O88551 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Cldn1O88551 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cldn1O88551 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cldn1O88551 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cldn1O88551 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn1O88551 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cldn1O88551 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.81□□□□□ -0.36
Cldn1O88551 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cldn1O88551 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.81□□□□□ -0.36
Cldn1O88551 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Mir8102-201ENSMUST00000184148 139 ntBASIC12.81□□□□□ -0.36
Cldn1O88551 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.81□□□□□ -0.36
Cldn1O88551 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms