Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Nid2O88322 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC19.23■□□□□ 0.67
Nid2O88322 AC154846.1-201ENSMUST00000226278 862 ntBASIC19.23■□□□□ 0.67
Nid2O88322 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC19.22■□□□□ 0.67
Nid2O88322 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nid2O88322 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Gm11425-201ENSMUST00000119608 498 ntBASIC19.22■□□□□ 0.67
Nid2O88322 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nid2O88322 Gm5354-201ENSMUST00000182417 973 ntBASIC19.22■□□□□ 0.67
Nid2O88322 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC19.22■□□□□ 0.67
Nid2O88322 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC19.22■□□□□ 0.67
Nid2O88322 Gm9396-201ENSMUST00000076703 567 ntBASIC19.22■□□□□ 0.67
Nid2O88322 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid2O88322 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nid2O88322 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid2O88322 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nid2O88322 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Nid2O88322 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid2O88322 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid2O88322 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid2O88322 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid2O88322 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Nid2O88322 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nid2O88322 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nid2O88322 Gm12585-201ENSMUST00000117307 290 ntBASIC19.21■□□□□ 0.67
Nid2O88322 Gm12341-201ENSMUST00000119724 503 ntBASIC19.21■□□□□ 0.67
Nid2O88322 Gm33320-201ENSMUST00000192232 530 ntBASIC19.21■□□□□ 0.67
Nid2O88322 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Nid2O88322 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid2O88322 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid2O88322 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Nid2O88322 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid2O88322 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid2O88322 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid2O88322 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nid2O88322 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nid2O88322 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nid2O88322 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nid2O88322 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nid2O88322 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nid2O88322 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nid2O88322 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nid2O88322 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC19.2■□□□□ 0.66
Nid2O88322 Gm4984-201ENSMUST00000115987 360 ntBASIC19.2■□□□□ 0.66
Nid2O88322 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nid2O88322 Mir6420-201ENSMUST00000185032 102 ntBASIC19.2■□□□□ 0.66
Nid2O88322 AC155252.1-201ENSMUST00000226462 1208 ntBASIC19.2■□□□□ 0.66
Nid2O88322 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nid2O88322 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nid2O88322 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nid2O88322 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nid2O88322 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nid2O88322 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nid2O88322 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC19.19■□□□□ 0.66
Nid2O88322 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nid2O88322 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC19.19■□□□□ 0.66
Nid2O88322 Gm5303-201ENSMUST00000117943 1252 ntBASIC19.19■□□□□ 0.66
Nid2O88322 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC19.19■□□□□ 0.66
Nid2O88322 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nid2O88322 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.19■□□□□ 0.66
Nid2O88322 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nid2O88322 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms