Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vamp4O70480 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vamp4O70480 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vamp4O70480 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vamp4O70480 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Vamp4O70480 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Vamp4O70480 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Vamp4O70480 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vamp4O70480 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vamp4O70480 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.82■□□□□ 0.6
Vamp4O70480 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Vamp4O70480 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vamp4O70480 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.82■□□□□ 0.6
Vamp4O70480 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vamp4O70480 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Vamp4O70480 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Vamp4O70480 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.81■□□□□ 0.6
Vamp4O70480 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.81■□□□□ 0.6
Vamp4O70480 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.81■□□□□ 0.6
Vamp4O70480 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.81■□□□□ 0.6
Vamp4O70480 Mir6990-201ENSMUST00000183724 91 ntBASIC18.81■□□□□ 0.6
Vamp4O70480 Gm2451-201ENSMUST00000199447 999 ntBASIC18.81■□□□□ 0.6
Vamp4O70480 Gm10290-201ENSMUST00000200451 999 ntBASIC18.81■□□□□ 0.6
Vamp4O70480 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.81■□□□□ 0.6
Vamp4O70480 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.81■□□□□ 0.6
Vamp4O70480 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.81■□□□□ 0.6
Vamp4O70480 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vamp4O70480 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vamp4O70480 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vamp4O70480 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vamp4O70480 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.8■□□□□ 0.6
Vamp4O70480 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.8■□□□□ 0.6
Vamp4O70480 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.8■□□□□ 0.6
Vamp4O70480 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vamp4O70480 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.8■□□□□ 0.6
Vamp4O70480 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
Vamp4O70480 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.8■□□□□ 0.6
Vamp4O70480 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.8■□□□□ 0.6
Vamp4O70480 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vamp4O70480 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Vamp4O70480 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vamp4O70480 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vamp4O70480 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vamp4O70480 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vamp4O70480 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Vamp4O70480 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Gm5479-201ENSMUST00000160578 435 ntBASIC18.79■□□□□ 0.6
Vamp4O70480 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.79■□□□□ 0.6
Vamp4O70480 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.79■□□□□ 0.6
Vamp4O70480 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
Vamp4O70480 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vamp4O70480 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vamp4O70480 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vamp4O70480 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vamp4O70480 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Vamp4O70480 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Vamp4O70480 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.78■□□□□ 0.6
Vamp4O70480 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vamp4O70480 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Vamp4O70480 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Vamp4O70480 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.78■□□□□ 0.6
Vamp4O70480 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vamp4O70480 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Vamp4O70480 Olfr286-202ENSMUST00000205305 969 ntBASIC18.78■□□□□ 0.6
Vamp4O70480 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vamp4O70480 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vamp4O70480 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vamp4O70480 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms