Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.52□□□□□ -0.73
Vamp8O70404 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Vamp8O70404 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Vamp8O70404 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC10.52□□□□□ -0.73
Vamp8O70404 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Vamp8O70404 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Vamp8O70404 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.52□□□□□ -0.73
Vamp8O70404 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC10.52□□□□□ -0.73
Vamp8O70404 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.52□□□□□ -0.73
Vamp8O70404 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Vamp8O70404 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.52□□□□□ -0.73
Vamp8O70404 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Vamp8O70404 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vamp8O70404 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Vamp8O70404 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Vamp8O70404 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Vamp8O70404 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
Vamp8O70404 Gm6858-201ENSMUST00000208582 1468 ntBASIC10.51□□□□□ -0.73
Vamp8O70404 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Vamp8O70404 Gm7290-201ENSMUST00000104990 617 ntBASIC10.51□□□□□ -0.73
Vamp8O70404 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC10.51□□□□□ -0.73
Vamp8O70404 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC10.51□□□□□ -0.73
Vamp8O70404 Gm12821-201ENSMUST00000120022 600 ntBASIC10.51□□□□□ -0.73
Vamp8O70404 Gm12918-201ENSMUST00000120234 636 ntBASIC10.51□□□□□ -0.73
Vamp8O70404 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.51□□□□□ -0.73
Vamp8O70404 Gm15710-201ENSMUST00000121821 636 ntBASIC10.51□□□□□ -0.73
Vamp8O70404 Gm5075-201ENSMUST00000196916 622 ntBASIC10.51□□□□□ -0.73
Vamp8O70404 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC10.51□□□□□ -0.73
Vamp8O70404 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC10.51□□□□□ -0.73
Vamp8O70404 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC10.51□□□□□ -0.73
Vamp8O70404 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
Vamp8O70404 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vamp8O70404 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC10.5□□□□□ -0.73
Vamp8O70404 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC10.5□□□□□ -0.73
Vamp8O70404 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Vamp8O70404 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 AC154855.1-201ENSMUST00000227353 1458 ntBASIC10.5□□□□□ -0.73
Vamp8O70404 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.5□□□□□ -0.73
Vamp8O70404 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.5□□□□□ -0.73
Vamp8O70404 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Vamp8O70404 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms