Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.4□□□□□ -0.42
SncaO55042 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SncaO55042 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.4□□□□□ -0.42
SncaO55042 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SncaO55042 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SncaO55042 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SncaO55042 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.4□□□□□ -0.43
SncaO55042 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SncaO55042 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.39□□□□□ -0.43
SncaO55042 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
SncaO55042 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SncaO55042 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SncaO55042 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SncaO55042 Gm15372-201ENSMUST00000120729 834 ntBASIC12.39□□□□□ -0.43
SncaO55042 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Gm7284-201ENSMUST00000131667 944 ntBASIC12.39□□□□□ -0.43
SncaO55042 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.39□□□□□ -0.43
SncaO55042 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SncaO55042 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SncaO55042 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SncaO55042 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
SncaO55042 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SncaO55042 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.39□□□□□ -0.43
SncaO55042 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SncaO55042 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SncaO55042 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SncaO55042 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SncaO55042 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SncaO55042 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SncaO55042 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SncaO55042 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.38□□□□□ -0.43
SncaO55042 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SncaO55042 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SncaO55042 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SncaO55042 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SncaO55042 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SncaO55042 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms