Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rnf13O54965 Carlr-201ENSMUST00000181515 2574 ntBASIC13.58□□□□□ -0.24
Rnf13O54965 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.57□□□□□ -0.24
Rnf13O54965 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rnf13O54965 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rnf13O54965 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Rnf13O54965 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf13O54965 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Gm7506-201ENSMUST00000207758 815 ntBASIC13.57□□□□□ -0.24
Rnf13O54965 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.57□□□□□ -0.24
Rnf13O54965 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf13O54965 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rnf13O54965 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rnf13O54965 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.57□□□□□ -0.24
Rnf13O54965 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf13O54965 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf13O54965 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.56□□□□□ -0.24
Rnf13O54965 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rnf13O54965 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rnf13O54965 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.56□□□□□ -0.24
Rnf13O54965 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rnf13O54965 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.56□□□□□ -0.24
Rnf13O54965 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rnf13O54965 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.56□□□□□ -0.24
Rnf13O54965 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.56□□□□□ -0.24
Rnf13O54965 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.56□□□□□ -0.24
Rnf13O54965 Gm27704-201ENSMUST00000185094 107 ntBASIC13.56□□□□□ -0.24
Rnf13O54965 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.56□□□□□ -0.24
Rnf13O54965 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.56□□□□□ -0.24
Rnf13O54965 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rnf13O54965 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Rnf13O54965 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.56□□□□□ -0.24
Rnf13O54965 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf13O54965 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.56□□□□□ -0.24
Rnf13O54965 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.55□□□□□ -0.24
Rnf13O54965 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Rnf13O54965 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Rnf13O54965 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Rnf13O54965 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.55□□□□□ -0.24
Rnf13O54965 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.55□□□□□ -0.24
Rnf13O54965 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Rnf13O54965 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms