Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.41□□□□□ -0.26
Dkk1O54908 Mdga2-212ENSMUST00000222987 1388 ntTSL 5 BASIC13.41□□□□□ -0.26
Dkk1O54908 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Dkk1O54908 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Dkk1O54908 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.41□□□□□ -0.26
Dkk1O54908 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Dkk1O54908 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Dkk1O54908 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Dkk1O54908 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Dkk1O54908 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Dkk1O54908 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Dkk1O54908 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.4□□□□□ -0.26
Dkk1O54908 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Dkk1O54908 Gm13884-201ENSMUST00000118103 829 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.4□□□□□ -0.26
Dkk1O54908 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Mir8098-201ENSMUST00000184011 137 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC13.4□□□□□ -0.26
Dkk1O54908 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC13.4□□□□□ -0.26
Dkk1O54908 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC13.4□□□□□ -0.26
Dkk1O54908 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Gm38233-201ENSMUST00000194259 807 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 Gm6089-201ENSMUST00000197666 938 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Gm43761-201ENSMUST00000202132 991 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 Gm6376-201ENSMUST00000209407 580 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 AL929417.1-201ENSMUST00000214901 124 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 AC096628.1-201ENSMUST00000226060 641 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Dkk1O54908 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC13.4□□□□□ -0.26
Dkk1O54908 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.4□□□□□ -0.26
Dkk1O54908 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Dkk1O54908 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Dkk1O54908 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Dkk1O54908 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.4□□□□□ -0.26
Dkk1O54908 4930408K08Rik-201ENSMUST00000195936 1436 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Dkk1O54908 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.39□□□□□ -0.27
Dkk1O54908 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Dkk1O54908 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Dkk1O54908 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Dkk1O54908 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Dkk1O54908 Gm12885-201ENSMUST00000122246 328 ntBASIC13.39□□□□□ -0.27
Dkk1O54908 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Dkk1O54908 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Dkk1O54908 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.39□□□□□ -0.27
Dkk1O54908 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC13.39□□□□□ -0.27
Dkk1O54908 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC13.39□□□□□ -0.27
Dkk1O54908 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC13.39□□□□□ -0.27
Dkk1O54908 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Dkk1O54908 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Dkk1O54908 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC13.39□□□□□ -0.27
Dkk1O54908 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC13.39□□□□□ -0.27
Dkk1O54908 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Dkk1O54908 Gm5864-201ENSMUST00000202263 970 ntBASIC13.39□□□□□ -0.27
Dkk1O54908 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.39□□□□□ -0.27
Dkk1O54908 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC13.39□□□□□ -0.27
Dkk1O54908 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC13.39□□□□□ -0.27
Dkk1O54908 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.39□□□□□ -0.27
Dkk1O54908 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.39□□□□□ -0.27
Dkk1O54908 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Dkk1O54908 AC162934.3-201ENSMUST00000223015 841 ntBASIC13.39□□□□□ -0.27
Dkk1O54908 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Dkk1O54908 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Dkk1O54908 Gm45885-202ENSMUST00000211520 1383 ntBASIC13.39□□□□□ -0.27
Dkk1O54908 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Dkk1O54908 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Dkk1O54908 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms