Protein–RNA interactions for Protein: O54751

Crx, Cone-rod homeobox protein, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrxO54751 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CrxO54751 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CrxO54751 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.93□□□□□ -0.66
CrxO54751 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC10.93□□□□□ -0.66
CrxO54751 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC10.93□□□□□ -0.66
CrxO54751 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
CrxO54751 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
CrxO54751 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CrxO54751 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CrxO54751 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
CrxO54751 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CrxO54751 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.92□□□□□ -0.66
CrxO54751 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CrxO54751 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
CrxO54751 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
CrxO54751 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.92□□□□□ -0.66
CrxO54751 Il3ra-202ENSMUST00000223589 738 ntBASIC10.92□□□□□ -0.66
CrxO54751 AC135637.1-201ENSMUST00000227750 365 ntBASIC10.92□□□□□ -0.66
CrxO54751 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC10.92□□□□□ -0.66
CrxO54751 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
CrxO54751 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
CrxO54751 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CrxO54751 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CrxO54751 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.92□□□□□ -0.66
CrxO54751 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CrxO54751 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CrxO54751 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CrxO54751 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CrxO54751 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CrxO54751 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC10.91□□□□□ -0.66
CrxO54751 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Gm7638-201ENSMUST00000121348 967 ntBASIC10.91□□□□□ -0.66
CrxO54751 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC10.91□□□□□ -0.66
CrxO54751 Gm10698-201ENSMUST00000182663 604 ntBASIC10.91□□□□□ -0.66
CrxO54751 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CrxO54751 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CrxO54751 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CrxO54751 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CrxO54751 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Gm32996-201ENSMUST00000199828 1447 ntBASIC10.91□□□□□ -0.66
CrxO54751 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CrxO54751 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CrxO54751 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.91□□□□□ -0.66
CrxO54751 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CrxO54751 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC10.9□□□□□ -0.66
CrxO54751 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CrxO54751 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CrxO54751 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CrxO54751 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CrxO54751 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CrxO54751 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CrxO54751 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms