Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn6O35454 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn6O35454 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.31■□□□□ 0.2
Clcn6O35454 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn6O35454 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn6O35454 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn6O35454 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn6O35454 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.31■□□□□ 0.2
Clcn6O35454 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn6O35454 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn6O35454 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn6O35454 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.3■□□□□ 0.2
Clcn6O35454 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.3■□□□□ 0.2
Clcn6O35454 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Mir770-201ENSMUST00000103252 94 ntBASIC16.3■□□□□ 0.2
Clcn6O35454 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC16.3■□□□□ 0.2
Clcn6O35454 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Clcn6O35454 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC16.3■□□□□ 0.2
Clcn6O35454 Gm19231-201ENSMUST00000193212 830 ntBASIC16.3■□□□□ 0.2
Clcn6O35454 Gm43708-201ENSMUST00000198857 961 ntBASIC16.3■□□□□ 0.2
Clcn6O35454 AC159297.2-201ENSMUST00000219567 1075 ntBASIC16.3■□□□□ 0.2
Clcn6O35454 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Clcn6O35454 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Clcn6O35454 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Clcn6O35454 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Clcn6O35454 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn6O35454 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.3■□□□□ 0.2
Clcn6O35454 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.29■□□□□ 0.2
Clcn6O35454 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Clcn6O35454 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Clcn6O35454 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Clcn6O35454 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Gm15515-201ENSMUST00000117827 822 ntBASIC16.29■□□□□ 0.2
Clcn6O35454 Gm12664-201ENSMUST00000118306 913 ntBASIC16.29■□□□□ 0.2
Clcn6O35454 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.29■□□□□ 0.2
Clcn6O35454 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC16.29■□□□□ 0.2
Clcn6O35454 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Clcn6O35454 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC16.29■□□□□ 0.2
Clcn6O35454 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.29■□□□□ 0.2
Clcn6O35454 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.29■□□□□ 0.2
Clcn6O35454 Gm37560-201ENSMUST00000194289 1000 ntBASIC16.29■□□□□ 0.2
Clcn6O35454 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.29■□□□□ 0.2
Clcn6O35454 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC16.29■□□□□ 0.2
Clcn6O35454 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Gm10819-201ENSMUST00000099988 561 ntBASIC16.29■□□□□ 0.2
Clcn6O35454 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.29■□□□□ 0.2
Clcn6O35454 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn6O35454 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 4930408K08Rik-201ENSMUST00000195936 1436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Gm14098-201ENSMUST00000119295 623 ntBASIC16.28■□□□□ 0.2
Clcn6O35454 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.28■□□□□ 0.2
Clcn6O35454 Gm9499-201ENSMUST00000180888 964 ntBASIC16.28■□□□□ 0.2
Clcn6O35454 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Gm18352-201ENSMUST00000189113 902 ntBASIC16.28■□□□□ 0.2
Clcn6O35454 Gm42796-201ENSMUST00000199913 1087 ntBASIC16.28■□□□□ 0.2
Clcn6O35454 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms