Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.53■□□□□ 0.08
Ebf3O08791 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ebf3O08791 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ebf3O08791 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.53■□□□□ 0.08
Ebf3O08791 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Gm14722-201ENSMUST00000118943 689 ntBASIC15.53■□□□□ 0.08
Ebf3O08791 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.53■□□□□ 0.08
Ebf3O08791 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.53■□□□□ 0.08
Ebf3O08791 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.53■□□□□ 0.08
Ebf3O08791 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.53■□□□□ 0.08
Ebf3O08791 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.53■□□□□ 0.08
Ebf3O08791 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Ebf3O08791 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ebf3O08791 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ebf3O08791 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ebf3O08791 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ebf3O08791 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ebf3O08791 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ebf3O08791 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ebf3O08791 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.52■□□□□ 0.08
Ebf3O08791 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ebf3O08791 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ebf3O08791 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ebf3O08791 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.52■□□□□ 0.08
Ebf3O08791 Gm22175-201ENSMUST00000175007 78 ntBASIC15.52■□□□□ 0.08
Ebf3O08791 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ebf3O08791 Gm2272-201ENSMUST00000194903 582 ntBASIC15.52■□□□□ 0.08
Ebf3O08791 Gm18057-201ENSMUST00000208220 503 ntBASIC15.52■□□□□ 0.08
Ebf3O08791 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.52■□□□□ 0.08
Ebf3O08791 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.52■□□□□ 0.08
Ebf3O08791 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ebf3O08791 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ebf3O08791 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ebf3O08791 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ebf3O08791 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ebf3O08791 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Ebf3O08791 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ebf3O08791 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ebf3O08791 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ebf3O08791 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ebf3O08791 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ebf3O08791 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.52■□□□□ 0.07
Ebf3O08791 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.52■□□□□ 0.07
Ebf3O08791 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ebf3O08791 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.51■□□□□ 0.07
Ebf3O08791 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.51■□□□□ 0.07
Ebf3O08791 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.51■□□□□ 0.07
Ebf3O08791 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.51■□□□□ 0.07
Ebf3O08791 Gm7774-201ENSMUST00000200064 533 ntBASIC15.51■□□□□ 0.07
Ebf3O08791 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ebf3O08791 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ebf3O08791 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.51■□□□□ 0.07
Ebf3O08791 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ebf3O08791 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf3O08791 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms