Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.28□□□□□ -0.12
Sh3yl1O08641 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.28□□□□□ -0.12
Sh3yl1O08641 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sh3yl1O08641 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.28□□□□□ -0.12
Sh3yl1O08641 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.28□□□□□ -0.12
Sh3yl1O08641 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.28□□□□□ -0.12
Sh3yl1O08641 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3yl1O08641 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sh3yl1O08641 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3yl1O08641 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3yl1O08641 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sh3yl1O08641 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sh3yl1O08641 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3yl1O08641 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.12
Sh3yl1O08641 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3yl1O08641 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3yl1O08641 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3yl1O08641 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3yl1O08641 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3yl1O08641 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Gm11779-201ENSMUST00000118541 368 ntBASIC14.27□□□□□ -0.13
Sh3yl1O08641 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Gm18489-201ENSMUST00000172565 551 ntBASIC14.27□□□□□ -0.13
Sh3yl1O08641 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Gm7787-201ENSMUST00000216858 688 ntBASIC14.27□□□□□ -0.13
Sh3yl1O08641 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sh3yl1O08641 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3yl1O08641 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.26□□□□□ -0.13
Sh3yl1O08641 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Gm12134-201ENSMUST00000122109 520 ntBASIC14.26□□□□□ -0.13
Sh3yl1O08641 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.26□□□□□ -0.13
Sh3yl1O08641 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.26□□□□□ -0.13
Sh3yl1O08641 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.26□□□□□ -0.13
Sh3yl1O08641 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3yl1O08641 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.25□□□□□ -0.13
Sh3yl1O08641 Gm27300-201ENSMUST00000184085 97 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms