Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1bO08603 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1bO08603 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.27□□□□□ -0.29
Raet1bO08603 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.27□□□□□ -0.29
Raet1bO08603 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Raet1bO08603 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1bO08603 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1bO08603 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1bO08603 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1bO08603 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1bO08603 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1bO08603 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1bO08603 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1bO08603 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1bO08603 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Raet1bO08603 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.26□□□□□ -0.29
Raet1bO08603 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.26□□□□□ -0.29
Raet1bO08603 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Raet1bO08603 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Raet1bO08603 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.26□□□□□ -0.29
Raet1bO08603 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.26□□□□□ -0.29
Raet1bO08603 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.26□□□□□ -0.29
Raet1bO08603 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.26□□□□□ -0.29
Raet1bO08603 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Gm7461-201ENSMUST00000058918 827 ntBASIC13.26□□□□□ -0.29
Raet1bO08603 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.26□□□□□ -0.29
Raet1bO08603 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.26□□□□□ -0.29
Raet1bO08603 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Raet1bO08603 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.26□□□□□ -0.29
Raet1bO08603 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Raet1bO08603 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1bO08603 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.25□□□□□ -0.29
Raet1bO08603 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.25□□□□□ -0.29
Raet1bO08603 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.25□□□□□ -0.29
Raet1bO08603 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.25□□□□□ -0.29
Raet1bO08603 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.25□□□□□ -0.29
Raet1bO08603 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1bO08603 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Raet1bO08603 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.24□□□□□ -0.29
Raet1bO08603 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Raet1bO08603 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Raet1bO08603 Gm27300-201ENSMUST00000184085 97 ntBASIC13.24□□□□□ -0.29
Raet1bO08603 Gm27335-201ENSMUST00000184758 97 ntBASIC13.24□□□□□ -0.29
Raet1bO08603 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.24□□□□□ -0.29
Raet1bO08603 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.24□□□□□ -0.29
Raet1bO08603 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1bO08603 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms