Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.27□□□□□ -0.29
Raet1aO08602 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.27□□□□□ -0.29
Raet1aO08602 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.27□□□□□ -0.29
Raet1aO08602 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.27□□□□□ -0.29
Raet1aO08602 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.27□□□□□ -0.29
Raet1aO08602 Mzt1-203ENSMUST00000227948 952 ntBASIC13.27□□□□□ -0.29
Raet1aO08602 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.27□□□□□ -0.29
Raet1aO08602 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.27□□□□□ -0.29
Raet1aO08602 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Raet1aO08602 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Raet1aO08602 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.26□□□□□ -0.29
Raet1aO08602 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.26□□□□□ -0.29
Raet1aO08602 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Raet1aO08602 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Raet1aO08602 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.26□□□□□ -0.29
Raet1aO08602 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.26□□□□□ -0.29
Raet1aO08602 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.26□□□□□ -0.29
Raet1aO08602 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.26□□□□□ -0.29
Raet1aO08602 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.26□□□□□ -0.29
Raet1aO08602 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Gm7461-201ENSMUST00000058918 827 ntBASIC13.26□□□□□ -0.29
Raet1aO08602 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.26□□□□□ -0.29
Raet1aO08602 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.26□□□□□ -0.29
Raet1aO08602 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Raet1aO08602 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.26□□□□□ -0.29
Raet1aO08602 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Raet1aO08602 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Raet1aO08602 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Raet1aO08602 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.25□□□□□ -0.29
Raet1aO08602 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.25□□□□□ -0.29
Raet1aO08602 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.25□□□□□ -0.29
Raet1aO08602 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.25□□□□□ -0.29
Raet1aO08602 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.25□□□□□ -0.29
Raet1aO08602 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Raet1aO08602 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1aO08602 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Raet1aO08602 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms