Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Gm45328-201ENSMUST00000210942 917 ntBASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Gm9172-201ENSMUST00000212092 954 ntBASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Gm18622-201ENSMUST00000219361 595 ntBASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shisa8J3QNX5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Mir6982-201ENSMUST00000184354 68 ntBASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Gm29518-201ENSMUST00000190858 372 ntBASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shisa8J3QNX5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shisa8J3QNX5 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms