Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm23984-201ENSMUST00000157139 203 ntBASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Ccdc180J3QNE4 Gm13034-201ENSMUST00000121342 3177 ntBASIC26.89■■□□□ 1.9
Ccdc180J3QNE4 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC26.89■■□□□ 1.9
Ccdc180J3QNE4 Gm45384-201ENSMUST00000210451 277 ntBASIC26.89■■□□□ 1.9
Ccdc180J3QNE4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
Ccdc180J3QNE4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
Ccdc180J3QNE4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
Ccdc180J3QNE4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ccdc180J3QNE4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Ccdc180J3QNE4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ccdc180J3QNE4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ccdc180J3QNE4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC26.89■■□□□ 1.89
Ccdc180J3QNE4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC26.89■■□□□ 1.89
Ccdc180J3QNE4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Ccdc180J3QNE4 Gm6745-201ENSMUST00000199216 526 ntBASIC26.89■■□□□ 1.89
Ccdc180J3QNE4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC26.89■■□□□ 1.89
Ccdc180J3QNE4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Ccdc180J3QNE4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ccdc180J3QNE4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ccdc180J3QNE4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ccdc180J3QNE4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Cdk7-205ENSMUST00000225990 1159 ntBASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc180J3QNE4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc180J3QNE4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc180J3QNE4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Ccdc180J3QNE4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Ccdc180J3QNE4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc180J3QNE4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Ccdc180J3QNE4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc180J3QNE4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc180J3QNE4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc180J3QNE4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC26.86■■□□□ 1.89
Ccdc180J3QNE4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC26.86■■□□□ 1.89
Ccdc180J3QNE4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc180J3QNE4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC26.86■■□□□ 1.89
Ccdc180J3QNE4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 AC162801.1-201ENSMUST00000220612 198 ntBASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Gm9797-201ENSMUST00000052902 613 ntBASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Gm11839-201ENSMUST00000120647 1953 ntBASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc180J3QNE4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc180J3QNE4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc180J3QNE4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc180J3QNE4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms