Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Gm13226-201ENSMUST00000117838 404 ntBASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Gm28760-201ENSMUST00000185995 736 ntBASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Gm28934-201ENSMUST00000186491 346 ntBASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 AC156574.1-201ENSMUST00000227084 452 ntBASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-1G3UXB3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Gm13183-201ENSMUST00000118615 789 ntBASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Gm15782-201ENSMUST00000121073 445 ntBASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Dupd1-202ENSMUST00000224735 548 ntBASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 AC154424.1-201ENSMUST00000225883 799 ntBASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.24■□□□□ 0.35
Nkx1-1G3UXB3 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Gm27001-201ENSMUST00000182252 936 ntBASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Gm42430-201ENSMUST00000197209 616 ntBASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 AC133517.2-201ENSMUST00000226820 690 ntBASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Gm5356-201ENSMUST00000093326 615 ntBASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx1-1G3UXB3 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx1-1G3UXB3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Nkx1-1G3UXB3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx1-1G3UXB3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx1-1G3UXB3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.22■□□□□ 0.35
Nkx1-1G3UXB3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx1-1G3UXB3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx1-1G3UXB3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Nkx1-1G3UXB3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.22■□□□□ 0.35
Nkx1-1G3UXB3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx1-1G3UXB3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.22■□□□□ 0.35
Nkx1-1G3UXB3 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nkx1-1G3UXB3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx1-1G3UXB3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms