Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NpcdF8VQB8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NpcdF8VQB8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Gm5566-201ENSMUST00000116118 459 ntBASIC17.94■□□□□ 0.46
NpcdF8VQB8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Gm20445-201ENSMUST00000061905 565 ntBASIC17.94■□□□□ 0.46
NpcdF8VQB8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NpcdF8VQB8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
NpcdF8VQB8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Shd-206ENSMUST00000225145 998 ntBASIC17.93■□□□□ 0.46
NpcdF8VQB8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NpcdF8VQB8 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Gm9719-201ENSMUST00000162765 543 ntBASIC17.92■□□□□ 0.46
NpcdF8VQB8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NpcdF8VQB8 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.92■□□□□ 0.46
NpcdF8VQB8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NpcdF8VQB8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NpcdF8VQB8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.91■□□□□ 0.46
NpcdF8VQB8 Gm42612-201ENSMUST00000197986 623 ntBASIC17.91■□□□□ 0.46
NpcdF8VQB8 Gm43170-201ENSMUST00000199827 612 ntBASIC17.91■□□□□ 0.46
NpcdF8VQB8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NpcdF8VQB8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.91■□□□□ 0.46
NpcdF8VQB8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NpcdF8VQB8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms