Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Gm25990-201ENSMUST00000102440 86 ntBASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Gm6376-201ENSMUST00000209407 580 ntBASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh9F8VPK8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh9F8VPK8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh9F8VPK8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms